STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v008270Mannitol 2-dehydrogenase. (505 aa)    
Predicted Functional Partners:
cut6
Acetyl-CoA carboxylase.
     
 0.788
SORD-1
Sorbitol dehydrogenase.
    
 0.774
ard-1
L-arabinitol 4-dehydrogenase.
    
 0.774
ladA
L-arabinitol 4-dehydrogenase.
    
 0.774
lad1
L-arabinitol 4-dehydrogenase.
    
 0.774
SORD-0
Sorbitol dehydrogenase.
    
 0.774
fabD
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.757
SCP2-1
Fatty acid-binding protein.
    
 0.754
hsdl2
Hydroxysteroid dehydrogenase-like protein 2.
    
 0.754
CTRI78_v004822
Putative methylcrotonoyl-CoA carboxylase beta chain.
    
 0.750
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.