STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VOSASpore development regulator VOSA. (357 aa)    
Predicted Functional Partners:
sudA
Structural maintenance of chromosomes protein.
   
 0.980
psc3
Cohesin subunit psc3.
   
 0.978
rad21
Cohesin subunit rad21.
   
 0.974
psm1
Structural maintenance of chromosomes protein.
   
 0.952
CTRI78_v004751
Uncharacterized protein.
   
 0.952
CTRI78_v007508
Uncharacterized protein.
   
 0.905
pds5
Sister chromatid cohesion protein pds5.
   
 0.905
smc5
Structural maintenance of chromosomes protein 5.
   
 0.903
SMC4
Structural maintenance of chromosomes protein.
   
 0.873
cut14
Structural maintenance of chromosomes protein.
   
 0.830
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.