STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v008115Uncharacterized protein. (1023 aa)    
Predicted Functional Partners:
CTRI78_v003388
SLD3 domain-containing protein.
  
 
  0.607
CTRI78_v008617
Uncharacterized protein.
  
 
  0.601
CTRI78_v004969
GAR domain-containing protein.
  
 
  0.589
CTRI78_v001746
Uncharacterized protein.
  
 
  0.563
crlA
Cyclic AMP receptor-like protein A.
    
  0.562
CTRI78_v006071
EGF-like domain-containing protein.
  
 
  0.537
CTRI78_v000136
Uncharacterized protein.
    
 0.531
apsA-0
Anucleate primary sterigmata protein A.
  
 
   0.519
CTRI78_v010361
Uncharacterized protein.
  
 
  0.506
CTRI78_v006231
Uncharacterized protein.
  
 
  0.494
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.