STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPS6Nonribosomal peptide synthetase 6. (1411 aa)    
Predicted Functional Partners:
CTRI78_v005136
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.882
trp-3
Tryptophan synthase.
  
 
 0.851
his-3
Histidine biosynthesis trifunctional protein.
   
  
 0.809
armB-1
Orsellinic acid synthase ArmB.
 
 0.794
npgA
4'-phosphopantetheinyl transferase NpgA.
  
 0.689
NPS2-0
Nonribosomal peptide synthetase 2.
 
    
0.682
fadD13
Long-chain-fatty-acid--CoA ligase FadD13.
 
 
0.677
GUP1
Glycerol uptake protein 1; Belongs to the membrane-bound acyltransferase family.
  
  
 0.630
CTRI78_v003206
Acyl-CoA synthetase family member 3.
  
  0.607
terA
Non-reducing polyketide synthase terA.
  
 0.602
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.