STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ade2Adenine deaminase 2. (420 aa)    
Predicted Functional Partners:
CTRI78_v008582
Dihydroorotate dehydrogenase.
  
 0.853
CTRI78_v003046
Dihydroorotate dehydrogenase (fumarate); Catalyzes the conversion of dihydroorotate to orotate with fumarate as the electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily.
  
 0.853
pyrABCN
Protein pyrABCN.
  
 0.829
CPA1
Carbamoyl-phosphate synthase arginine-specific small chain.
  
 0.829
arg4
Carbamoyl-phosphate synthase arginine-specific large chain.
  
 0.829
GOT1-0
Vesicle transport protein GOT1.
  
 
 0.804
trp-3
Tryptophan synthase.
  
 
  0.744
uapA
Uric acid-xanthine permease.
  
  
 0.740
CTRI78_v003702
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
 
 0.667
CBR1-0
NADH-cytochrome b5 reductase 1.
  
 
 0.647
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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