Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTRI78_v000136 | CTRI78_v007236 | A0A4R8RT01 | A0A4R8RK19 | Uncharacterized protein. | Uncharacterized protein. | 0.519 |
CTRI78_v000136 | CTRI78_v007663 | A0A4R8RT01 | A0A4R8R1G0 | Uncharacterized protein. | GH16 domain-containing protein. | 0.605 |
CTRI78_v003797 | CTRI78_v007663 | A0A4R8RIQ1 | A0A4R8R1G0 | Uncharacterized protein. | GH16 domain-containing protein. | 0.437 |
CTRI78_v003797 | sec16 | A0A4R8RIQ1 | A0A4R8RZI7 | Uncharacterized protein. | Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family. | 0.667 |
CTRI78_v005413 | CTRI78_v007663 | A0A4V6QEX7 | A0A4R8R1G0 | GRIP domain-containing protein. | GH16 domain-containing protein. | 0.421 |
CTRI78_v005413 | sec16 | A0A4V6QEX7 | A0A4R8RZI7 | GRIP domain-containing protein. | Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family. | 0.512 |
CTRI78_v007236 | CTRI78_v000136 | A0A4R8RK19 | A0A4R8RT01 | Uncharacterized protein. | Uncharacterized protein. | 0.519 |
CTRI78_v007236 | CTRI78_v007663 | A0A4R8RK19 | A0A4R8R1G0 | Uncharacterized protein. | GH16 domain-containing protein. | 0.431 |
CTRI78_v007236 | pmt3 | A0A4R8RK19 | A0A4R8QRS8 | Uncharacterized protein. | Ubiquitin-like protein pmt3/smt3. | 0.852 |
CTRI78_v007663 | CTRI78_v000136 | A0A4R8R1G0 | A0A4R8RT01 | GH16 domain-containing protein. | Uncharacterized protein. | 0.605 |
CTRI78_v007663 | CTRI78_v003797 | A0A4R8R1G0 | A0A4R8RIQ1 | GH16 domain-containing protein. | Uncharacterized protein. | 0.437 |
CTRI78_v007663 | CTRI78_v005413 | A0A4R8R1G0 | A0A4V6QEX7 | GH16 domain-containing protein. | GRIP domain-containing protein. | 0.421 |
CTRI78_v007663 | CTRI78_v007236 | A0A4R8R1G0 | A0A4R8RK19 | GH16 domain-containing protein. | Uncharacterized protein. | 0.431 |
CTRI78_v007663 | DUR1,2 | A0A4R8R1G0 | A0A4R8RXF2 | GH16 domain-containing protein. | Urea amidolyase. | 0.451 |
CTRI78_v007663 | lamA | A0A4R8R1G0 | A0A4R8QXY2 | GH16 domain-containing protein. | Putative urea carboxylase. | 0.451 |
CTRI78_v007663 | pmt3 | A0A4R8R1G0 | A0A4R8QRS8 | GH16 domain-containing protein. | Ubiquitin-like protein pmt3/smt3. | 0.455 |
CTRI78_v007663 | sec16 | A0A4R8R1G0 | A0A4R8RZI7 | GH16 domain-containing protein. | Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family. | 0.443 |
CTRI78_v007663 | sfc1 | A0A4R8R1G0 | A0A4R8RMW5 | GH16 domain-containing protein. | Transcription factor tau subunit sfc1. | 0.472 |
CTRI78_v007663 | sfc4 | A0A4R8R1G0 | A0A4R8Q312 | GH16 domain-containing protein. | Transcription factor tau subunit sfc4. | 0.477 |
DUR1,2 | CTRI78_v007663 | A0A4R8RXF2 | A0A4R8R1G0 | Urea amidolyase. | GH16 domain-containing protein. | 0.451 |
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