STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phzS5-methylphenazine-1-carboxylate 1-monooxygenase. (449 aa)    
Predicted Functional Partners:
trp-3
Tryptophan synthase.
     
 0.709
kyn-2
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.
  
 
 0.609
NUDT12
Peroxisomal NADH pyrophosphatase NUDT12.
    
  0.508
CTRI78_v003702
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.460
ERG7
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 
 0.448
shc
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 
 0.448
cyb5r4
Cytochrome b5 reductase 4; Belongs to the cytochrome b5 family.
    
 0.443
TRI1-1
Cytochrome P450 monooxygenase TRI1.
   
 0.442
tor2
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
 
      0.435
CTRI78_v010166
Uncharacterized protein.
    
  0.427
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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