Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTRI78_v001822 | CTRI78_v005045 | A0A4R8RN65 | A0A4R8RFW3 | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7. | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | 0.999 |
CTRI78_v001822 | NUC1 | A0A4R8RN65 | A0A4R8R6Z1 | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7. | Endonuclease. | 0.630 |
CTRI78_v002365 | NUC1 | A0A4R8RQP7 | A0A4R8R6Z1 | Glucose-6-phosphate 1-epimerase; Catalyzes the interconversion between the alpha and beta anomers from at least three hexose 6-phosphate sugars (Glc6P, Gal6P, and Man6P). | Endonuclease. | 0.750 |
CTRI78_v002365 | TRZ1 | A0A4R8RQP7 | A0A4R8RGN5 | Glucose-6-phosphate 1-epimerase; Catalyzes the interconversion between the alpha and beta anomers from at least three hexose 6-phosphate sugars (Glc6P, Gal6P, and Man6P). | TRNase Z TRZ1. | 0.426 |
CTRI78_v002365 | trz1 | A0A4R8RQP7 | A0A4R8RCR2 | Glucose-6-phosphate 1-epimerase; Catalyzes the interconversion between the alpha and beta anomers from at least three hexose 6-phosphate sugars (Glc6P, Gal6P, and Man6P). | Ribonuclease Z 1. | 0.586 |
CTRI78_v005045 | CTRI78_v001822 | A0A4R8RFW3 | A0A4R8RN65 | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7. | 0.999 |
CTRI78_v005045 | NUC1 | A0A4R8RFW3 | A0A4R8R6Z1 | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | Endonuclease. | 0.827 |
FAS1 | NUC1 | A0A4R8RKG6 | A0A4R8R6Z1 | Fatty acid synthase subunit beta; Belongs to the fungal fatty acid synthetase subunit beta family. | Endonuclease. | 0.548 |
FEN1A | NUC1 | A0A4R8Q3K7 | A0A4R8R6Z1 | Flap endonuclease 1-A. | Endonuclease. | 0.598 |
NUC1 | CTRI78_v001822 | A0A4R8R6Z1 | A0A4R8RN65 | Endonuclease. | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7. | 0.630 |
NUC1 | CTRI78_v002365 | A0A4R8R6Z1 | A0A4R8RQP7 | Endonuclease. | Glucose-6-phosphate 1-epimerase; Catalyzes the interconversion between the alpha and beta anomers from at least three hexose 6-phosphate sugars (Glc6P, Gal6P, and Man6P). | 0.750 |
NUC1 | CTRI78_v005045 | A0A4R8R6Z1 | A0A4R8RFW3 | Endonuclease. | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | 0.827 |
NUC1 | FAS1 | A0A4R8R6Z1 | A0A4R8RKG6 | Endonuclease. | Fatty acid synthase subunit beta; Belongs to the fungal fatty acid synthetase subunit beta family. | 0.548 |
NUC1 | FEN1A | A0A4R8R6Z1 | A0A4R8Q3K7 | Endonuclease. | Flap endonuclease 1-A. | 0.598 |
NUC1 | TRZ1 | A0A4R8R6Z1 | A0A4R8RGN5 | Endonuclease. | TRNase Z TRZ1. | 0.886 |
NUC1 | bir1 | A0A4R8R6Z1 | A0A4R8RAP9 | Endonuclease. | Protein bir1. | 0.586 |
NUC1 | birc5.2-b | A0A4R8R6Z1 | A0A4R8R5S3 | Endonuclease. | Baculoviral IAP repeat-containing protein 5.2-B. | 0.546 |
NUC1 | dnr-8 | A0A4R8R6Z1 | A0A4R8REJ8 | Endonuclease. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.677 |
NUC1 | trz1 | A0A4R8R6Z1 | A0A4R8RCR2 | Endonuclease. | Ribonuclease Z 1. | 0.925 |
TRZ1 | CTRI78_v002365 | A0A4R8RGN5 | A0A4R8RQP7 | TRNase Z TRZ1. | Glucose-6-phosphate 1-epimerase; Catalyzes the interconversion between the alpha and beta anomers from at least three hexose 6-phosphate sugars (Glc6P, Gal6P, and Man6P). | 0.426 |
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