STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v006963ATPase inhibitor. (100 aa)    
Predicted Functional Partners:
CTRI78_v005767
54S ribosomal protein L8; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.644
CTRI78_v004000
37S ribosomal protein MRP2.
   
   0.644
CTRI78_v012047
Protein FYV4.
    
   0.638
CTRI78_v012122
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
    
   0.638
CTRI78_v011679
54S ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.
    
   0.638
CTRI78_v011618
Uncharacterized protein.
    
   0.638
CTRI78_v010172
54S ribosomal protein L38; Belongs to the universal ribosomal protein uL14 family.
    
   0.638
CTRI78_v010016
Putative 37S ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
    
   0.638
CTRI78_v009690
54S ribosomal protein L24.
    
   0.638
CTRI78_v010686
54S ribosomal protein L2.
    
   0.638
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.