STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RED2-0Dehydrogenase RED2; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (384 aa)    
Predicted Functional Partners:
CTRI78_v006983
Uncharacterized protein.
 
      0.771
HIR1
Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.645
ASF1
Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
    
 0.644
DGAT2A
Diacylglycerol O-acyltransferase 2A.
     
 0.585
PDH1-1
Phytoene desaturase.
     
 0.577
CTRI78_v001612
Histone transcription regulator 3-like protein.
    
 0.572
ssb2
Replication factor A protein 2.
    
  0.567
CTRI78_v004759
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
  0.546
csh3
Protein csh3.
   
  0.533
gsfF-3
Cytochrome P450 monooxygenase gsfF; Belongs to the cytochrome P450 family.
   
 
  0.515
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.