STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v005660Uncharacterized protein. (468 aa)    
Predicted Functional Partners:
trp-3
Tryptophan synthase.
    
  0.712
dmg
Dimethylglycine oxidase.
  
 0.645
CTRI78_v003976
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.605
CTRI78_v009247
DAO domain-containing protein.
  
 0.597
ordL-1
Putative oxidoreductase OrdL.
  
 0.597
puuB-0
Gamma-glutamylputrescine oxidoreductase.
  
 0.597
puuB-1
Gamma-glutamylputrescine oxidoreductase.
  
 0.597
ptaL-2
Oxidoreductase ptaL.
    
  0.567
CTRI78_v010108
Putative catechol O-methyltransferase 2.
    
  0.567
fer8
Fe-regulated protein 8.
    
  0.567
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.