STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v005247SH3 domain-containing protein. (1166 aa)    
Predicted Functional Partners:
bzz1
Protein BZZ1.
    
 0.774
LAS17
Proline-rich protein LAS17.
   
 
 0.769
CTRI78_v001269
WH2 domain-containing protein.
   
 0.701
MYO1
Myosin-1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
 0.671
sla1-0
Actin cytoskeleton-regulatory complex protein sla1.
   
 
 0.668
CTRI78_v010510
Regulator of cytoskeleton and endocytosis.
    
 
 0.643
csh3
Protein csh3.
    
 0.634
CTRI78_v000136
Uncharacterized protein.
    
  0.605
CAP2
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 
 0.487
sfc4
Transcription factor tau subunit sfc4.
    
  0.477
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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