STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
P4ha2Prolyl 4-hydroxylase subunit alpha-2. (274 aa)    
Predicted Functional Partners:
pdiA-1
Protein disulfide-isomerase.
    
 0.658
pdiA-0
Protein disulfide-isomerase.
    
 0.658
PDI-1
Protein disulfide-isomerase.
    
 0.658
PDI-0
Protein disulfide-isomerase.
    
 0.658
P4H13
Prolyl 4-hydroxylase 13.
  
  
 
0.575
CTRI78_v001744
Putative prolyl 4-hydroxylase 10.
  
  
 
0.564
CTRI78_v004004
Putative prolyl 4-hydroxylase 10.
  
  
 
0.552
ATG22
Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.
    
 0.543
P4H5
Prolyl 4-hydroxylase 5.
  
  
 
0.527
MYO2
Myosin-2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
   0.400
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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