STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v004531Mitochondrial amidoxime-reducing component 1. (377 aa)    
Predicted Functional Partners:
CTRI78_v003702
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 
 0.716
cyb5r4
Cytochrome b5 reductase 4; Belongs to the cytochrome b5 family.
   
 
  0.667
PLA1-1
Phospholipase A I.
 
      0.611
CTRI78_v011978
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
 
      0.494
for
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
 
      0.435
CTRI78_v009098
Cytochrome b2.
   
 
  0.433
CTRI78_v005949
Cytochrome b2; Belongs to the cytochrome b5 family.
   
 
  0.433
CTRI78_v003622
Cytochrome b2; Belongs to the cytochrome b5 family.
   
 
  0.433
CTRI78_v000324
Cytochrome b2; Belongs to the cytochrome b5 family.
   
 
  0.433
CTRI78_v001058
Cytochrome b2.
   
 
  0.433
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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