STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sol5-2Bifunctional solanapyrone synthase. (500 aa)    
Predicted Functional Partners:
CTRI78_v009098
Cytochrome b2.
   
 0.681
CTRI78_v005949
Cytochrome b2; Belongs to the cytochrome b5 family.
   
 0.681
CTRI78_v003622
Cytochrome b2; Belongs to the cytochrome b5 family.
   
 0.681
CTRI78_v000324
Cytochrome b2; Belongs to the cytochrome b5 family.
   
 0.681
CTRI78_v001058
Cytochrome b2.
   
 0.681
CTRI78_v001320
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
    
 0.628
chyH-1
FAD-linked oxidoreductase chyH; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
  
  
  0.601
sor8
FAD-linked oxidoreductase sor8; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
  
 
  0.598
CTRI78_v003702
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.581
chyH-0
FAD-linked oxidoreductase chyH.
  
  
  0.551
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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