STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v004094Scyllo-inositol 2-dehydrogenase. (359 aa)    
Predicted Functional Partners:
CTRI78_v008363
Bifunctional protein GAL10.
  
 
 0.788
CTRI78_v006474
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.788
qa-x
Inositol-1-monophosphatase.
    
 0.752
INM2
Inositol-1-monophosphatase.
    
 0.752
MIOX1
Inositol oxygenase 1.
   
 
 0.730
dhlB
(S)-2-haloacid dehalogenase.
   
    0.644
yvrE
Putative sugar lactone lactonase YvrE.
  
 
 0.597
CTRI78_v002449
Scyllo-inositol 2-dehydrogenase.
  
  
 
0.593
CTRI78_v005638
Scyllo-inositol 2-dehydrogenase.
  
  
 
0.589
GAL1
Galactokinase.
  
 0.577
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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