STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MT1Sphingolipid C9-methyltransferase 1. (512 aa)    
Predicted Functional Partners:
eef1b
Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.885
PAN1
Actin cytoskeleton-regulatory complex protein PAN1.
 
  
   0.804
TEF
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.798
NEW1
[NU+] prion formation protein 1.
   
 
 0.760
CTRI78_v009214
Peroxiredoxin PRX1.
   
 0.737
gsa1
Glutathione synthetase.
    
 0.684
CTRI78_v011103
Putative methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.677
gtr-1
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
     
 0.674
ywrD
Glutathione hydrolase-like YwrD proenzyme.
     
 0.672
rpc40
DNA-directed RNA polymerases I and III subunit RPAC1.
   
 
 0.654
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.