STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v003100Uncharacterized protein. (161 aa)    
Predicted Functional Partners:
CTRI78_v005136
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.882
trp-3
Tryptophan synthase.
  
 
 0.851
his-3
Histidine biosynthesis trifunctional protein.
   
  
 0.809
npgA
4'-phosphopantetheinyl transferase NpgA.
  
 0.689
GUP1
Glycerol uptake protein 1; Belongs to the membrane-bound acyltransferase family.
  
  
 0.630
wA
Conidial yellow pigment biosynthesis polyketide synthase.
   
 0.594
micA
Microperfuranone synthase.
   
 0.522
CTRI78_v009140
Uncharacterized protein.
   
 0.522
4CLL7
4-coumarate--CoA ligase-like 7.
   
 0.522
AFT1-1
Acyl-CoA ligase AFT1-1.
   
 0.522
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.