STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
imp1Mitochondrial inner membrane protease subunit 1. (177 aa)    
Predicted Functional Partners:
CTRI78_v003259
Nitrogen permease regulator 2-like protein.
   
 0.974
iml1
Vacuolar membrane-associated protein iml1.
    
 0.965
CTRI78_v000143
Putative RWD, RING finger and WD repeat-containing protein.
    
 0.965
CTRI78_v008679
Putative WD repeat-containing protein.
    
 0.943
CTRI78_v003992
Uncharacterized protein.
    
 0.943
SPCS1
Signal peptidase complex subunit 1.
   
 0.898
SPC3
Signal peptidase subunit 3.
    
 0.894
cyn1
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
   
 0.852
SPC2
Signal peptidase complex subunit SPC2.
   
 0.852
mus-51
ATP-dependent DNA helicase II subunit 1.
     
 0.791
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.