STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v005888Uncharacterized protein. (293 aa)    
Predicted Functional Partners:
OpS4-0
FAD-dependent monooxygenase OpS4.
 
      0.883
OpS4-4
FAD-dependent monooxygenase OpS4.
 
      0.856
nahG-0
Salicylate hydroxylase.
 
      0.781
trp-3
Tryptophan synthase.
     
 0.709
xlnD-0
3-hydroxybenzoate 6-hydroxylase 1.
 
      0.657
OpS4-7
FAD-dependent monooxygenase OpS4.
 
   
  0.637
kyn-2
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.
  
 
 0.609
OpS4-5
FAD-dependent monooxygenase OpS4.
 
      0.543
OpS4-2
FAD-dependent monooxygenase OpS4.
 
   
  0.543
CTRI78_v007491
Putative serine esterase.
  
  0.538
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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