STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAP1Aminopeptidase. (887 aa)    
Predicted Functional Partners:
trp-3
Tryptophan synthase.
    
 0.802
CTRI78_v009688
Aspartate aminotransferase.
    
 0.771
CTRI78_v005884
Aspartate aminotransferase.
    
 0.771
ssb2
Replication factor A protein 2.
   
 
 0.734
rab8A
Ras-related protein Rab-8A.
 
  
 0.692
ywrD
Glutathione hydrolase-like YwrD proenzyme.
     
 0.688
CYS4
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.677
gsa1
Glutathione synthetase.
   
 
  0.676
cys-17
Cysteine synthase 1.
     
 0.676
gcs-1
Glutamate--cysteine ligase.
     
 0.675
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.