STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v002683Uncharacterized protein. (360 aa)    
Predicted Functional Partners:
crp-79
Ubiquitin-60S ribosomal protein L40.
    
  0.788
CDY1
Testis-specific chromodomain protein Y 1.
    
 0.766
HAT2
Histone acetyltransferase type B subunit 2.
    
 0.729
set3
SET domain-containing protein 3.
    
 0.726
DOT1
Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones.
    
 0.725
CTRI78_v010304
Chromo domain-containing protein.
    
 0.724
CTRI78_v007857
Chromo domain-containing protein.
    
 0.724
swi6
Chromatin-associated protein swi6.
    
 0.724
CTRI78_v004012
Chromo domain-containing protein.
    
 0.724
radR-1
Transcription factor radR.
    
  0.711
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.