STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v002230Uncharacterized protein. (361 aa)    
Predicted Functional Partners:
CTRI78_v003702
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
     
 0.549
SCP2-1
Fatty acid-binding protein.
  
 0.528
hsdl2
Hydroxysteroid dehydrogenase-like protein 2.
  
 0.528
CTRI78_v011400
4-hydroxyphenylpyruvate dioxygenase.
     
 0.435
FUB1-1
Reducing polyketide synthase FUB1.
    
  0.420
PKS2
Reducing polyketide synthase PKS2.
    
  0.420
CTRI78_v011443
ATP synthase subunit delta.
    
 0.420
FUB1-0
Reducing polyketide synthase FUB1.
    
  0.420
CTRI78_v010279
Uncharacterized protein.
    
  0.420
CTRI78_v010056
Non-reducing polyketide synthase pks27.
    
  0.420
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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