STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubxn-1UBX domain-containing protein 1. (311 aa)    
Predicted Functional Partners:
Derl2
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.993
cdc48
Cell division control protein 48; Belongs to the AAA ATPase family.
    
 0.990
CTRI78_v006514
26S proteasome regulatory subunit 4-like protein; Belongs to the AAA ATPase family.
   
 
  0.982
ubx1
UBX domain-containing protein 1.
   
 0.979
yjoB
Putative ATPase YjoB.
    
 0.977
ucp10
UBX domain-containing protein 10.
   
 0.951
afg2
ATPase family gene 2 protein; Belongs to the AAA ATPase family.
    
 0.937
UBX5
UBX domain-containing protein 5.
    
 
 0.929
ASPSCR1
Tether containing UBX domain for GLUT4.
   
 0.852
HRD1
ERAD-associated E3 ubiquitin-protein ligase HRD1.
    
 0.822
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
Server load: low (10%) [HD]