STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v001850Putative peptide chain release factor 1. (420 aa)    
Predicted Functional Partners:
MTQ2-1
ERF1 methyltransferase catalytic subunit MTQ2.
  
 
 0.986
MTQ1
Mitochondrial N(5)-glutamine methyltransferase MTQ1.
  
 
 0.986
CTRI78_v005767
54S ribosomal protein L8; Belongs to the bacterial ribosomal protein bL17 family.
 
 
 0.972
CTRI78_v007526
37S ribosomal protein S9.
 
 
 0.967
CTRI78_v002985
Putative 54S ribosomal protein L32.
  
 
 0.962
rps20
40S ribosomal protein S20.
   
 
 0.960
CTRI78_v001232
37S ribosomal protein MRP17.
  
 
 0.960
CTRI78_v000305
Ribosomal protein S16.
  
 
 0.960
crp-74
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
  
 
 0.959
CTRI78_v012122
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.956
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.