STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v001803Uncharacterized protein. (385 aa)    
Predicted Functional Partners:
CTRI78_v002543
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.982
PEX12
Peroxisome assembly protein 12.
    
 0.974
PEX13
Peroxisomal membrane protein PAS20.
    
 0.906
PAY32
Peroxisomal targeting signal receptor.
    
 0.899
Pex19
Peroxisomal biogenesis factor 19.
    
 
 0.887
PEX14
Peroxisomal membrane protein PER10.
    
 0.885
PEX1
Peroxisome biosynthesis protein PAS1.
    
 0.873
PEX6
Peroxisomal biogenesis factor 6.
   
 0.856
UBC1
Ubiquitin-conjugating enzyme E2-16 kDa; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.805
UBC28
Ubiquitin-conjugating enzyme E2 28.
    
 0.805
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.