CTRI78_v001292 protein (Colletotrichum trifolii)

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Score

CTRI78_v001292

Putative RNA-binding protein. (382 aa)

Predicted Functional Partners:

snu66

0.931

sec9

0.912

CTRI78_v000661

0.885

prp3

0.879

CTRI78_v005712

0.872

sme1-1

0.843

smd2

0.841

ubp10

0.839

smd1-1

0.837

prpf31

0.819

Your Current Organism:

Colletotrichum trifolii

NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTRI78_v000661	CTRI78_v001292	A0A4R8S0L5	A0A4R8RPV5	Putative small nuclear ribonucleoprotein F.	Putative RNA-binding protein.	0.885
CTRI78_v000661	CTRI78_v005712	A0A4R8S0L5	A0A4R8RH66	Putative small nuclear ribonucleoprotein F.	Uncharacterized protein.	0.855
CTRI78_v000661	prp3	A0A4R8S0L5	A0A4V3HSL1	Putative small nuclear ribonucleoprotein F.	U4/U5/U6 small nuclear ribonucleoprotein prp3.	0.969
CTRI78_v000661	prpf31	A0A4R8S0L5	A0A4R8RI97	Putative small nuclear ribonucleoprotein F.	U4/U6 small nuclear ribonucleoprotein Prp31.	0.982
CTRI78_v000661	smd1-1	A0A4R8S0L5	A0A4R8PPD9	Putative small nuclear ribonucleoprotein F.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.999
CTRI78_v000661	smd2	A0A4R8S0L5	A0A4R8RIX3	Putative small nuclear ribonucleoprotein F.	Small nuclear ribonucleoprotein Sm D2.	0.999
CTRI78_v000661	sme1-1	A0A4R8S0L5	A0A4R8PXR1	Putative small nuclear ribonucleoprotein F.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
CTRI78_v000661	snu66	A0A4R8S0L5	A0A4R8S0K9	Putative small nuclear ribonucleoprotein F.	U4/U6.U5 tri-snRNP-associated protein snu66.	0.990
CTRI78_v000661	ubp10	A0A4R8S0L5	A0A4V3HX85	Putative small nuclear ribonucleoprotein F.	Putative mRNA-splicing protein ubp10.	0.872
CTRI78_v001292	CTRI78_v000661	A0A4R8RPV5	A0A4R8S0L5	Putative RNA-binding protein.	Putative small nuclear ribonucleoprotein F.	0.885
CTRI78_v001292	CTRI78_v005712	A0A4R8RPV5	A0A4R8RH66	Putative RNA-binding protein.	Uncharacterized protein.	0.872
CTRI78_v001292	prp3	A0A4R8RPV5	A0A4V3HSL1	Putative RNA-binding protein.	U4/U5/U6 small nuclear ribonucleoprotein prp3.	0.879
CTRI78_v001292	prpf31	A0A4R8RPV5	A0A4R8RI97	Putative RNA-binding protein.	U4/U6 small nuclear ribonucleoprotein Prp31.	0.819
CTRI78_v001292	sec9	A0A4R8RPV5	A0A4R8RT21	Putative RNA-binding protein.	Protein transport protein sec9.	0.912
CTRI78_v001292	smd1-1	A0A4R8RPV5	A0A4R8PPD9	Putative RNA-binding protein.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.837
CTRI78_v001292	smd2	A0A4R8RPV5	A0A4R8RIX3	Putative RNA-binding protein.	Small nuclear ribonucleoprotein Sm D2.	0.841
CTRI78_v001292	sme1-1	A0A4R8RPV5	A0A4R8PXR1	Putative RNA-binding protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.843
CTRI78_v001292	snu66	A0A4R8RPV5	A0A4R8S0K9	Putative RNA-binding protein.	U4/U6.U5 tri-snRNP-associated protein snu66.	0.931
CTRI78_v001292	ubp10	A0A4R8RPV5	A0A4V3HX85	Putative RNA-binding protein.	Putative mRNA-splicing protein ubp10.	0.839
CTRI78_v005712	CTRI78_v000661	A0A4R8RH66	A0A4R8S0L5	Uncharacterized protein.	Putative small nuclear ribonucleoprotein F.	0.855