STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v000082Putative methyltransferase. (286 aa)    
Predicted Functional Partners:
COQ7
5-demethoxyubiquinone hydroxylase, mitochondrial; Catalyzes the hydroxylation of 2-polyprenyl-3-methyl-6- methoxy-1,4-benzoquinol (DMQH2) during ubiquinone biosynthesis. Has also a structural role in the COQ enzyme complex, stabilizing other COQ polypeptides.
   
 0.743
CTRI78_v007530
Protein ABC1-like protein.
   
 0.698
CTRI78_v010836
ABC1 family protein.
    
 0.616
pbp-1
Penicillin-binding protein 4.
    
 0.579
MCP2
ABC1 family protein MCP2.
    
 0.579
lact-2
Beta-lactamase domain-containing protein 2.
    
 0.579
SUR7
Protein SUR7.
    
 0.579
mlcH-0
Acyltransferase mlcH.
    
 0.579
lovD-2
Acyltransferase LovD.
    
 0.579
CTRI78_v006083
ABC1 family protein.
    
 0.579
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.