Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTRI78_v002046 | HAT2 | A0A4R8RUU9 | A0A4R8RFJ5 | Uncharacterized protein. | Histone acetyltransferase type B subunit 2. | 0.573 |
CTRI78_v002046 | MUS81 | A0A4R8RUU9 | A0A4R8RJF0 | Uncharacterized protein. | Crossover junction endonuclease MUS81. | 0.623 |
CTRI78_v002046 | POL31 | A0A4R8RUU9 | A0A4R8RS71 | Uncharacterized protein. | DNA polymerase delta small subunit. | 0.645 |
CTRI78_v002046 | pol3 | A0A4R8RUU9 | A0A4R8R5Y3 | Uncharacterized protein. | DNA polymerase. | 0.623 |
CTRI78_v002046 | rad16 | A0A4R8RUU9 | A0A4R8RG23 | Uncharacterized protein. | DNA repair protein rad16. | 0.558 |
CTRI78_v002046 | smd1-1 | A0A4R8RUU9 | A0A4R8PPD9 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.588 |
CTRI78_v002046 | smd2 | A0A4R8RUU9 | A0A4R8RIX3 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D2. | 0.586 |
CTRI78_v002046 | sme1-1 | A0A4R8RUU9 | A0A4R8PXR1 | Uncharacterized protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.593 |
CTRI78_v002046 | smg1 | A0A4R8RUU9 | A0A4R8QTA2 | Uncharacterized protein. | Small nuclear ribonucleoprotein G. | 0.573 |
CTRI78_v002046 | smn1 | A0A4R8RUU9 | A0A4V3HW99 | Uncharacterized protein. | Survival motor neuron-like protein 1. | 0.630 |
HAT2 | CTRI78_v002046 | A0A4R8RFJ5 | A0A4R8RUU9 | Histone acetyltransferase type B subunit 2. | Uncharacterized protein. | 0.573 |
MUS81 | CTRI78_v002046 | A0A4R8RJF0 | A0A4R8RUU9 | Crossover junction endonuclease MUS81. | Uncharacterized protein. | 0.623 |
MUS81 | pol3 | A0A4R8RJF0 | A0A4R8R5Y3 | Crossover junction endonuclease MUS81. | DNA polymerase. | 0.787 |
MUS81 | rad16 | A0A4R8RJF0 | A0A4R8RG23 | Crossover junction endonuclease MUS81. | DNA repair protein rad16. | 0.968 |
POL31 | CTRI78_v002046 | A0A4R8RS71 | A0A4R8RUU9 | DNA polymerase delta small subunit. | Uncharacterized protein. | 0.645 |
POL31 | pol3 | A0A4R8RS71 | A0A4R8R5Y3 | DNA polymerase delta small subunit. | DNA polymerase. | 0.999 |
pol3 | CTRI78_v002046 | A0A4R8R5Y3 | A0A4R8RUU9 | DNA polymerase. | Uncharacterized protein. | 0.623 |
pol3 | MUS81 | A0A4R8R5Y3 | A0A4R8RJF0 | DNA polymerase. | Crossover junction endonuclease MUS81. | 0.787 |
pol3 | POL31 | A0A4R8R5Y3 | A0A4R8RS71 | DNA polymerase. | DNA polymerase delta small subunit. | 0.999 |
pol3 | rad16 | A0A4R8R5Y3 | A0A4R8RG23 | DNA polymerase. | DNA repair protein rad16. | 0.696 |
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