STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsp88Heat shock protein hsp88. (728 aa)    
Predicted Functional Partners:
CTRI78_v009645
Heat shock protein sti1-like protein.
   
 0.991
NUP152
Nucleoporin NUP152.
   
 0.984
psi1
Protein psi1.
  
 0.984
SSZ1
Ribosome-associated complex subunit SSZ1; Belongs to the heat shock protein 70 family.
  
0.956
ucp7
UBA domain-containing protein 7.
    
 0.956
SSB1
Ribosome-associated molecular chaperone SSB1; Belongs to the heat shock protein 70 family.
  
0.954
hsps-1
Heat shock 70 kDa protein; Belongs to the heat shock protein 70 family.
  
0.953
CTRI78_v007320
Heat shock 70 kDa protein; Belongs to the heat shock protein 70 family.
  
0.945
fes-1
Hsp70 nucleotide exchange factor fes-1.
   
 0.930
grp78
Endoplasmic reticulum chaperone BiP; Belongs to the heat shock protein 70 family.
  
0.914
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.