STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v001799Uncharacterized protein. (637 aa)    
Predicted Functional Partners:
ABCG11
ABC transporter G family member 11.
 
  
   0.571
CTRI78_v010666
Uncharacterized protein.
   
  0.550
CTRI78_v004759
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
  0.546
Mkl2
MKL/myocardin-like protein 2.
   
 
  0.543
ymaE
Lactamase_B domain-containing protein.
   
  0.514
OLE1
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
   
 0.512
CTRI78_v010947
Adrenodoxin-like protein.
   
  0.504
mug190
Meiotically up-regulated gene 190 protein.
   
   0.471
PAY32
Peroxisomal targeting signal receptor.
    
  0.465
fabD
Malonyl CoA-acyl carrier protein transacylase.
   
  0.458
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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