STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptaL-0Oxidoreductase ptaL. (388 aa)    
Predicted Functional Partners:
CTRI78_v003702
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 0.842
CTRI78_v010947
Adrenodoxin-like protein.
  
 0.762
ymaE
Lactamase_B domain-containing protein.
  
 0.762
cyb5r4
Cytochrome b5 reductase 4; Belongs to the cytochrome b5 family.
     
 0.738
gtr-1
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
   
 0.710
CTRI78_v002899
Putative thioredoxin reductase.
   
 0.670
rclA
Putative pyridine nucleotide-disulfide oxidoreductase RclA.
   
 0.670
CTRI78_v000359
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
     
 0.640
MET5
Sulfite reductase [NADPH] subunit beta.
   
 0.630
crnA
Nitrate/nitrite transporter.
   
 
 0.610
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.