STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIRLPirin-like protein; Belongs to the pirin family. (313 aa)    
Predicted Functional Partners:
CTRI78_v003702
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
 0.765
sla1-0
Actin cytoskeleton-regulatory complex protein sla1.
 
      0.747
trp-1
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
    
 
 0.589
NUDT12
Peroxisomal NADH pyrophosphatase NUDT12.
    
  0.531
hnt1
Hit family protein 1.
 
      0.507
ATG101
Autophagy-related protein 101.
      
 0.431
lgd1
L-galactonate dehydratase.
   
   0.427
AMT6-0
Glucan 1,4-alpha-maltohexaosidase.
   
  0.424
ags1
Cell wall alpha-1,3-glucan synthase ags1.
    
  0.410
ALKBH2-0
DNA oxidative demethylase ALKBH2.
    
  0.410
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.