STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mic-33Putative mitochondrial 2-oxoglutarate/malate carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (330 aa)    
Predicted Functional Partners:
CTRI78_v005045
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
  
 0.467
CTRI78_v002831
Acetolactate synthase.
 
      0.463
CTRI78_v003745
Uncharacterized protein.
    
 0.437
CTRI78_v000708
54S ribosomal protein L12.
    
 0.437
CTRI78_v010985
Uncharacterized protein.
    
   0.436
shy1
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
    
   0.436
sec-61
Protein transport protein SEC61 subunit alpha.
    
   0.436
rhp41
DNA repair protein rhp41.
 
      0.423
COX15
Cytochrome c oxidase assembly protein COX15.
   
 
 0.422
CTRI78_v006973
Cytochrome c1 heme protein.
   
 
 0.402
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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