Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASG1-1 | CTRI78_v003705 | A0A4V3HWP0 | A0A4R8RJB0 | Activator of stress genes 1. | Putative Xaa-Pro aminopeptidase. | 0.646 |
ASG1-1 | CTRI78_v003732 | A0A4V3HWP0 | A0A4R8RMB6 | Activator of stress genes 1. | Uncharacterized protein. | 0.597 |
ASG1-1 | CTRI78_v005050 | A0A4V3HWP0 | A0A4R8RFG2 | Activator of stress genes 1. | Putative acyltransferase. | 0.667 |
ASG1-1 | CTRI78_v005413 | A0A4V3HWP0 | A0A4V6QEX7 | Activator of stress genes 1. | GRIP domain-containing protein. | 0.710 |
ASG1-1 | CTRI78_v011763 | A0A4V3HWP0 | A0A4R8Q3A9 | Activator of stress genes 1. | CIA30 domain-containing protein. | 0.597 |
ASG1-1 | crp-79 | A0A4V3HWP0 | A0A4R8RRE7 | Activator of stress genes 1. | Ubiquitin-60S ribosomal protein L40. | 0.755 |
ASG1-1 | gsk3 | A0A4V3HWP0 | A0A4R8RX82 | Activator of stress genes 1. | Protein kinase gsk3; Belongs to the protein kinase superfamily. | 0.638 |
ASG1-1 | pteN | A0A4V3HWP0 | A0A4R8QW28 | Activator of stress genes 1. | annotation not available | 0.684 |
ASG1-1 | radR-1 | A0A4V3HWP0 | A0A4R8PPK7 | Activator of stress genes 1. | Transcription factor radR. | 0.597 |
ASG1-1 | ubi::crp-6 | A0A4V3HWP0 | A0A4R8RGQ8 | Activator of stress genes 1. | Ubiquitin-40S ribosomal protein S27a. | 0.597 |
CTRI78_v003705 | ASG1-1 | A0A4R8RJB0 | A0A4V3HWP0 | Putative Xaa-Pro aminopeptidase. | Activator of stress genes 1. | 0.646 |
CTRI78_v003732 | ASG1-1 | A0A4R8RMB6 | A0A4V3HWP0 | Uncharacterized protein. | Activator of stress genes 1. | 0.597 |
CTRI78_v003732 | crp-79 | A0A4R8RMB6 | A0A4R8RRE7 | Uncharacterized protein. | Ubiquitin-60S ribosomal protein L40. | 0.985 |
CTRI78_v003732 | gsk3 | A0A4R8RMB6 | A0A4R8RX82 | Uncharacterized protein. | Protein kinase gsk3; Belongs to the protein kinase superfamily. | 0.726 |
CTRI78_v003732 | pteN | A0A4R8RMB6 | A0A4R8QW28 | Uncharacterized protein. | annotation not available | 0.704 |
CTRI78_v005050 | ASG1-1 | A0A4R8RFG2 | A0A4V3HWP0 | Putative acyltransferase. | Activator of stress genes 1. | 0.667 |
CTRI78_v005413 | ASG1-1 | A0A4V6QEX7 | A0A4V3HWP0 | GRIP domain-containing protein. | Activator of stress genes 1. | 0.710 |
CTRI78_v011763 | ASG1-1 | A0A4R8Q3A9 | A0A4V3HWP0 | CIA30 domain-containing protein. | Activator of stress genes 1. | 0.597 |
CTRI78_v011763 | crp-79 | A0A4R8Q3A9 | A0A4R8RRE7 | CIA30 domain-containing protein. | Ubiquitin-60S ribosomal protein L40. | 0.990 |
CTRI78_v011763 | gsk3 | A0A4R8Q3A9 | A0A4R8RX82 | CIA30 domain-containing protein. | Protein kinase gsk3; Belongs to the protein kinase superfamily. | 0.727 |
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