STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alp11Cell polarity protein alp11. (240 aa)    
Predicted Functional Partners:
TBCE
Tubulin-specific chaperone E.
    
 0.763
trs23
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
    0.679
TBCD
Tubulin-specific chaperone D.
    
 0.636
TUBA
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.599
TUB1
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.599
CTRI78_v000761
Tubulin-specific chaperone A; Belongs to the TBCA family.
   
 
 0.566
CTRI78_v007458
Uncharacterized protein.
    
 0.559
EN3GAL
Galactan endo-beta-1,3-galactanase.
    
 0.559
ARL2
ADP-ribosylation factor-like protein 2; Belongs to the small GTPase superfamily. Arf family.
   
  
 0.534
gap1
GTPase-activating protein.
     
 0.435
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.