STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v002651Frataxin-like protein. (205 aa)    
Predicted Functional Partners:
CTRI78_v010509
Cysteine desulfurase.
   
 0.999
CTRI78_v009475
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
    
 0.999
CTRI78_v005219
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.987
LYRM4
LYR motif-containing protein 4; Belongs to the complex I LYR family.
    
 0.962
CTRI78_v011319
Putative transcriptional regulatory protein.
    
 0.947
CTRI78_v004146
Putative transcriptional regulatory protein.
    
 0.947
ustD
Cysteine desulfurase-like protein ustD.
    
 0.932
egt-2
Hercynylcysteine sulfoxide lyase.
    
 0.931
CTRI78_v010947
Adrenodoxin-like protein.
     
 0.829
CTRI78_v005950
J-type co-chaperone JAC1.
   
 
 0.807
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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