STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arg4Carbamoyl-phosphate synthase arginine-specific large chain. (1167 aa)    
Predicted Functional Partners:
CPA1
Carbamoyl-phosphate synthase arginine-specific small chain.
 
 0.999
ARG1
Argininosuccinate synthase.
 
 
 0.996
CTRI78_v000471
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
 
 
 0.992
CTRI78_v000447
Protein arg-6.
  
 
 0.976
ade4
Amidophosphoribosyltransferase.
  
 
 0.976
CTRI78_v008582
Dihydroorotate dehydrogenase.
  
 0.946
argH
Argininosuccinate lyase.
  
 
 0.946
CTRI78_v003046
Dihydroorotate dehydrogenase (fumarate); Catalyzes the conversion of dihydroorotate to orotate with fumarate as the electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily.
  
 0.919
CTRI78_v001345
Glutamine--fructose-6-phosphate aminotransferase.
   
 0.917
URA4
Dihydroorotase.
   
 
 0.915
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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