STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR70199.1Raffinose/stachyose/melibiose transport system permease protein. (306 aa)    
Predicted Functional Partners:
SDR70225.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.991
SDR70143.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.986
SDR81181.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
  0.974
SDS80811.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.959
SDT31194.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.958
SDS30247.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.916
SDT32159.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.916
SDR74490.1
Multiple sugar transport system permease protein.
  0.913
SDS73332.1
Multiple sugar transport system permease protein.
  0.911
SDS14949.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.910
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.