STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR74079.1LysM domain-containing protein. (205 aa)    
Predicted Functional Partners:
SDT24218.1
Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain.
 
 
 
  0.873
SDR69626.1
Peptidase family M23.
 
 
 
  0.757
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.738
SDS04586.1
IMP dehydrogenase.
    
  0.508
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.508
SDT02402.1
PRC-barrel domain-containing protein.
  
     0.503
SDS50665.1
DUF4097 and DUF4098 domain-containing protein YvlB.
   
   0.498
SDR74100.1
Cell fate regulator YaaT, PSP1 superfamily (controls sporulation, competence, biofilm development).
       0.468
SDT33323.1
Uncharacterized membrane protein.
  
     0.453
SDS69280.1
Orotidine-5'-phosphate decarboxylase.
  
  
  0.449
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.