STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR78912.1Alpha,alpha-trehalose phosphorylase. (839 aa)    
Predicted Functional Partners:
SDR78881.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/beta-phosphoglucomutase family hydrolase.
 
 0.999
SDT28746.1
Maltooligosyl trehalose hydrolase.
 
 
 0.906
SDT02614.1
Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
 0.897
SDS68610.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
 
 
 0.794
SDT02645.1
Trehalose 6-phosphate synthase.
    
 0.766
SDS45435.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
     
 0.736
SDS66631.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
     
 0.736
SDT40708.1
Sugar-phosphatase.
 
 
 0.628
SDS77619.1
Maltokinase.
  
  
 0.604
SDR78858.1
L-asparaginase II.
       0.541
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.