STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR80216.1Muramoyltetrapeptide carboxypeptidase. (315 aa)    
Predicted Functional Partners:
SDR80073.1
Peptide/nickel transport system substrate-binding protein.
 
    0.889
SDR80114.1
Peptide/nickel transport system permease protein.
 
    0.843
SDR80156.1
Peptide/nickel transport system permease protein.
 
    0.843
SDR80183.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     0.833
SDR80289.1
SIS domain-containing protein.
       0.783
SDT29207.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.712
SDR99399.1
D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).
 
     0.695
SDR76576.1
D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).
 
     0.531
SDR80032.1
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase.
       0.512
SDT32935.1
D-amino peptidase.
 
    0.470
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.