STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR82011.1Predicted ATPase. (887 aa)    
Predicted Functional Partners:
SDR81930.1
Hypothetical protein.
       0.802
SDT43827.1
Protein kinase domain-containing protein.
 
      0.789
SDR81866.1
Thioredoxin reductase (NADPH).
       0.569
SDR89389.1
Predicted ATPase.
 
  
 0.548
SDT34570.1
SIR2-like domain-containing protein.
  
     0.545
SDT04313.1
Serine/threonine protein kinase.
 
      0.477
SDS83634.1
DNA-binding transcriptional activator of the SARP family.
  
    0.447
SDR81834.1
Iron complex transport system substrate-binding protein.
       0.444
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.