STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR93055.1Hypothetical protein. (121 aa)    
Predicted Functional Partners:
SDR93095.1
Hypothetical protein.
 
     0.943
SDR98364.1
Polyketide cyclase / dehydrase and lipid transport.
  
     0.669
SDT36648.1
Hypothetical protein.
  
     0.587
SDR92974.1
NUDIX domain-containing protein.
       0.534
SDR75182.1
Protein of unknown function.
  
     0.526
SDR81054.1
ADP-ribose pyrophosphatase YjhB, NUDIX family.
  
     0.526
SDS27198.1
Copper transport outer membrane protein, MctB.
  
     0.522
SDR92778.1
Calcineurin-like phosphoesterase.
  
     0.466
SDS74112.1
DNA polymerase-1.
  
     0.464
SDR75129.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
  
     0.418
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.