STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR97117.1Transcriptional regulator, AsnC family. (187 aa)    
Predicted Functional Partners:
SDR97078.1
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.948
SDR97164.1
Spermidine/putrescine transport system substrate-binding protein.
 
     0.794
SDR97318.1
Spermidine/putrescine transport system permease protein.
 
     0.755
SDR97252.1
Spermidine/putrescine transport system permease protein.
 
     0.745
SDS14630.1
Siroheme synthase, N-terminal domain-containing protein.
  
 
 0.730
SDS65733.1
Para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase.
     
 0.716
SDT29207.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.703
potA
Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
     0.671
SDS65646.1
Transcriptional regulator, AsnC family.
  
     0.628
SDR97403.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
  0.515
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.