STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS09648.1Branched-chain amino acid transport system ATP-binding protein. (278 aa)    
Predicted Functional Partners:
SDS09626.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SDS09586.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
SDS09565.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
 0.995
SDS09796.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
 
0.993
SDT35899.1
ABC-2 type transport system ATP-binding protein.
 
   
 
0.883
SDS81331.1
Amino acid ABC transporter membrane protein, PAAT family.
    
 0.728
SDS09842.1
Uncharacterized conserved protein, DUF427 family.
       0.570
SDT27842.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
      0.558
SDS33368.1
ABC-2 type transport system ATP-binding protein.
 
   
 
0.539
SDT33862.1
Hypothetical protein.
    
  0.505
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.