STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS40102.1Endoglucanase. (527 aa)    
Predicted Functional Partners:
SDR94458.1
Hypothetical protein.
   
  0.917
SDS31754.1
Hypothetical protein.
   
  0.917
SDT35569.1
Broad-specificity cellobiase.
    
 0.783
SDT34263.1
Beta-glucosidase.
 
  
 0.746
SDR83534.1
Beta-glucosidase.
 
  
 0.742
SDS95673.1
Glycosyl transferase family 2.
    
 0.740
SDT08374.1
Glycosyl transferase family 2.
    
 0.740
SDR71725.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
 0.706
SDS48392.1
Beta-glucosidase.
    
 0.706
SDR84337.1
Hypothetical protein.
 
  
 0.681
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.