STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS43018.1Iron-containing redox enzyme. (372 aa)    
Predicted Functional Partners:
SDS43050.1
Iron-binding zinc finger CDGSH type.
 
     0.910
SDS42988.1
Glycosyltransferase like family 2.
       0.823
SDT09411.1
Hypothetical protein.
  
     0.461
SDS14517.1
Hypothetical protein.
  
     0.451
SDT08058.1
Polyketide cyclase / dehydrase and lipid transport.
  
     0.433
SDT21728.1
Rho termination factor, N-terminal domain.
  
     0.422
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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