STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS46678.1Hypothetical protein. (251 aa)    
Predicted Functional Partners:
SDS73114.1
Ribosomal protein S12 methylthiotransferase accessory factor.
  
     0.726
SDT33653.1
Hypothetical protein.
  
     0.726
SDS46723.1
DNA-binding transcriptional regulator, AcrR family.
 
     0.616
SDS45756.1
Hypothetical protein.
  
     0.550
SDS46767.1
Polyketide cyclase / dehydrase and lipid transport.
       0.534
SDR74420.1
Hypothetical protein.
  
     0.532
SDS46632.1
Aromatic acid exporter family member 1.
       0.506
SDT40998.1
Sorbitol/mannitol transport system substrate-binding protein.
  
     0.497
SDT31847.1
Conserved repeat domain-containing protein.
  
     0.493
SDS65036.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
  
     0.491
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.