STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS50665.1DUF4097 and DUF4098 domain-containing protein YvlB. (252 aa)    
Predicted Functional Partners:
SDS50561.1
Arc-like DNA binding domain-containing protein.
 
     0.958
SDS50717.1
Hypothetical protein.
       0.752
SDT24419.1
Signal transduction histidine kinase.
  
  
 0.640
SDS50476.1
Predicted dehydrogenase.
  
    0.561
SDT37938.1
DinB superfamily protein.
  
 
   0.550
SDT38015.1
Protein of unknown function.
 
  
 0.544
SDT40243.1
Pentapeptide repeat-containing protein.
  
 
   0.539
SDS05245.1
Hypothetical protein.
  
 
   0.525
SDT10334.1
DinB superfamily protein.
  
 
   0.521
SDR71497.1
Protein of unknown function.
   
   0.498
Your Current Organism:
Friedmanniella luteola
NCBI taxonomy Id: 546871
Other names: DSM 21741, F. luteola, Friedmanniella luteola Iwai et al. 2010, Friedmanniella sp. FA1, NBRC 104963, strain FA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.